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View Structure Prediction Details

Protein: GDL4_ARATH
Organism: Arabidopsis thaliana
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL4_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592372 - gi|21592372|gb|AAM64323.1| anter-specific proline-rich protein APG precursor, putative [Arabidopsis ...
372.0 [0..1] [402..1]

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Predicted Domain #1
Region A:
Residues: [1-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG  60
   61 PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK ANFLPYGMNF PDKVPTGRFC 120
  121 NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK 180
  181 QLTYFQEYIE KVKGFVGKEK AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS 240
  241 FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK 300
  301 LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY 360
  361 TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY DN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.0
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle