| Protein: | gi|15221505, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 285 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221505, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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296.0 | [0..1] | [285..1] |
|
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151.0 | [0..67] | [284..26] |
|
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148.0 | [0..82] | [284..37] |
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142.0 | [0..67] | [284..26] |
|
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141.0 | [0..63] | [284..50] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSS LNTVIQRCDN KISFARQASS 60
61 EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA SSAQGFFMRQ ASTNERTIPH 120
121 DAAASTKFSA TKTTGFDS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.488 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.448 | d.110.7 | Description not found. |
| View | Download | 0.399 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.371 | d.110.2 | GAF domain-like |
| View | Download | 0.371 | d.110.2 | GAF domain-like |
| View | Download | 0.360 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.339 | d.26.1 | FKBP-like |
| View | Download | 0.246 | d.110.4 | SNARE-like |
| View | Download | 0.227 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.218 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.207 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.202 | a.39.2 | Insect pheromon/odorant-binding proteins |
|
Region A: Residues: [139-285] |
1 11 21 31 41 51
| | | | | |
1 SSPAYAAPHF SKPAKEDIFF PSLSPNLQKE RPKLDLPKLA NLGTVWSPRS NVAESTHSYV 60
61 VAIELPGASI NDIRVEVDNT NLTVTGRRTS ICQKVDAGTK ASILGYHKQE ILQGPFKVSW 120
121 PLPSNVNKDN VSAEFMDGIL RIVIPKL
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| Detection Method: | |
| Confidence: | 22.221849 |
| Match: | 1gmeA |
| Description: | Small heat shock protein |
Matching Structure (courtesy of the PDB): |
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