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View Structure Prediction Details

Protein: gi|18379053
Organism: Arabidopsis thaliana
Length: 714 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18379053.

Description E-value Query
Range
Subject
Range
gi|533707 - gi|533707|gb|AAA67356.1| 3-methylcrotonyl-CoA carboxylase precursor
654.0 [0..1] [714..1]

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Predicted Domain #1
Region A:
Residues: [1-714]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMMTVWALR RNVRRKNHSM LVRYISGSAS MKPKEQCIEK ILVANRGEIA CRIMRTAKRL  60
   61 GIQTVAVYSD ADRDSLHVKS ADEAVRIGPP SARLSYLSGV TIMEAAARTG AQAIHPGYGF 120
  121 LSESSDFAQL CEDSGLTFIG PPASAIRDMG DKSASKRIMG AAGVPLVPGY HGHEQDIDHM 180
  181 KSEAEKIGYP IIIKPTHGGG GKGMRIVQSG KDFADSFLGA QREAAASFGV NTILLEKYIT 240
  241 RPRHIEVQIF GDKHGNVLHL YERDCSVQRR HQKIIEEAPA AVGYYNAGTV EFIVDTESDQ 300
  301 FYFMEMNTRL QVEHPVTEMI VGQDLVEWQI RVANGEPLPL SQSEVPMSGH AFEARIYAEN 360
  361 VPKGFLPATG VLNHYRPVAV SPSVRVETGV EQGDTVSMHY DPMIAKLVVW GGNRGEALVK 420
  421 LKDCLSNFQV AGVPTNINFL QKLASHKEFA VGNVETHFIE HHKSDLFADE SNPAATEVAY 480
  481 KAVKHSAALV AACISTIEHS TWNESNHGKV PSIWYSNPPF RVHHEAKQTI ELEWNNECEG 540
  541 TGSNLISLGV RYQPDGSYLI EEGNDSPSLE LRVTRAGKCD FRVEAAGLSM NVSLAAYLKD 600
  601 GYKHIHIWHG SEHHQFKQKV GIEFSEDEEG VQHRTSSETS SHPPGTIVAP MAGLVVKVLV 660
  661 ENEAKVDQGQ PILVLEAMKM EHVVKAPSSG SIQDLKVKAG QQVSDGSALF RIKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 153.0
Match: 2qf7A
Description: No description for 2qf7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle