| Protein: | UBP15_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 924 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP15_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
756.0 | [0..1] | [924..1] |
|
|
389.0 | [0..1] | [883..1] |
|
|
365.0 | [0..52] | [747..378] |
|
|
361.0 | [0..51] | [752..349] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA 60
61 DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE TVAEQRSDSV TATCGVTVVA 120
121 PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.299 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.228 | N/A | N/A | c.108.1 | HAD-like |
| View | Download | 0.228 | N/A | N/A | c.108.1 | HAD-like |
| View | Download | 0.220 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.212 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.212 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.205 | N/A | N/A | c.10.2 | L domain-like |
|
Region A: Residues: [177-385] |
1 11 21 31 41 51
| | | | | |
1 SERVSFEKDS VLYDHGMDST MYSNNTTQAA KGKTSKSSVD FASLGISQND ITPQINTQGR 60
61 KSVGKQHSSK ANRESCRRDS ATVFDSSDEA ASAGGDNKTS HIKHKSRGNS YAAETNPRRH 120
121 SVDSSAVQMN GQSFVSGMQE SHKHENNLGV RSSFGCPNTQ YPSNGTRTAT LPRTGINKSG 180
181 EQSCTETSKK GQVAAVSKTV RSKDTGISE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [386-795] |
1 11 21 31 41 51
| | | | | |
1 ESNGISSTMG IMKMMGLRNS TKHDDRYKNL KMLFPYEEFL KFFQCEVFDL SPRGLVNCGN 60
61 SCYANAVLQS LTCTKPLVAY LLRRSHSRSC SGKDWCLMCE LEQHVMMLRE SGGPLSASRI 120
121 LSHMRSINCQ IGDGSQEDAH EFLRLLVASM QSICLERLGG ETKVDPRLQE TTLVQHMFGG 180
181 RLRSKVKCLR CDHESERYEN IMDLTLEIYG WVESLQDALT QFTRPEDLDG ENMYRCSRCA 240
241 GYVRARKELS IHEAPNILTI VLKRFQEGRY GKINKCISFP EMLDMIPFMT RTGDVPPLYM 300
301 LYAVIVHLDT LNASFSGHYI SYVKDLRGNW YRIDDSEIHP VPMTQVMSEG AYMLFYMRSY 360
361 PRPQRGEHNG KAPVHHSQPR NEMKEQRKPV NRFKPRADHK NTESSSSEWS
|
| Detection Method: | |
| Confidence: | 59.154902 |
| Match: | 1nb8A |
| Description: | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [796-924] |
1 11 21 31 41 51
| | | | | |
1 LFTSSDEASF TTESTRDSFS TIDYTDVCHV VDSSSPFAIF NNVYHNVEPS PHNTVACRMF 60
61 SGTKPETRYF VEQETNHNNT VVLDATPSLY PIPAPYPPHD YYDQSMYVNY ETNPEFNNGQ 120
121 DQDRTYSYW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.207 | b.1.2 | Fibronectin type III |
| View | Download | 0.207 | b.1.2 | Fibronectin type III |
