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View Structure Prediction Details

Protein: MTP10_ARATH
Organism: Arabidopsis thaliana
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTP10_ARATH.

Description E-value Query
Range
Subject
Range
gi|25402805, gi|... - gi|4966352|gb|AAD34683.1|AC006341_11 >F3O9.11 [Arabidopsis thaliana], pir||B86298 protein F3O9.11 [i...
291.0 [0..31] [428..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS  60
   61 WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY YKKQERLLEG FNEMETIHEN 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 2enkA
Description: No description for 2enkA was found.

Predicted Domain #2
Region A:
Residues: [122-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FASGVPTEEE MKKLAKSERL AVHISNATNL VLFVAKVYAS MESRSMAVIA STLDSLLDLL  60
   61 SGFILWFTAN AMRKPNQFHY PIGKRRMQPV GIIVFASVMA TLGLQVLLES GRQLVAKSGI 120
  121 HMNSTEEKWM IGIMVSVTIV KFLLMLYCRG FQNEIVRAYA QDHLFDVVTN SIGLATAVLA 180
  181 VKFYWWIDPT GAILIALYTI ATWARTVLEN VHSLIGRSAP PDFLAKLTFL IWNHHEQIKH 240
  241 IDTVRAYTFG SHYFVEVDIV LPEDMRLQEA HNIGETLQEK LEQLAEVERA FVHIDFEFTH 300
  301 RPEHKCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
cation transmembrane transporter activity 4.5307404935943 bayes_pls_golite062009
ion transmembrane transporter activity 4.4634224995221 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.1916987544196 bayes_pls_golite062009
transporter activity 2.72282838578572 bayes_pls_golite062009
transmembrane transporter activity 2.61155472577391 bayes_pls_golite062009
substrate-specific transporter activity 2.37288341875523 bayes_pls_golite062009
efflux transmembrane transporter activity 1.43383523050563 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.253156897715141 bayes_pls_golite062009
binding 0.112542057149574 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0523266677042269 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle