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View Structure Prediction Details

Protein: KEA6_ARATH
Organism: Arabidopsis thaliana
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KEA6_ARATH.

Description E-value Query
Range
Subject
Range
KEA4_ARATH - K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2
357.0 [0..9] [573..10]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGRRRRRF SLSSQQLALL LLLLSFFLCF SVASPRAISD SDLLDETVAN SSSSVASLNA  60
   61 SSSSSLVKPK EGSFADIIDR ALEKEFNESD QNEVADPGSF NNSVAGQQAV LETVARVKST 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNETKEEKRF QLHDVFNLNN DNRAEDTPTL IDRKDNVFII SNSKSKYPVL QLDLRLISDL  60
   61 VVVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [186-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSATCGGIAF ACAGQPVITG YLLAGSIIGP GGLNFISEMV QVETVAQFGV VFLLFALGLE  60
   61 FSTAKLKVVR SVAVLGGLLQ ILLFMFLCGI TVSLCGGKRS EGVFVGAFLS MSSTAVVLKF 120
  121 LMEKNSTNSL HGQVTIGILI LQDCAVGLLF ALLPVLEGNS GIVHGMLSIG KVVVLLLSFL 180
  181 AVLSILSRTC IPWLLKLMVS LSSQTNELYQ LAAVAFCLLV AWCSDKLGLS LELGSFAAGV 240
  241 MISTTDLAEH TLEQIEPIRN LFAALFLASI GMLVNVHFLW THVDILLASV ILVIIIKTTI 300
  301 VTTVVKGFGY NNKTALLVGI SLAQIGEFAF VLLSRASNLH LIEGKLYLLL LGTTALSLVT 360
  361 TPLVFKMIPA VVHLGILLKW FSPDSTIEKG EIVRSESGKQ RMILMSRQSH SS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.045757
Match: 1zcdA
Description: Crystal structure of the Na+/H+ antiporter NhaA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle