| Protein: | gi|42567760, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567760, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..1] | [434..1] |
|
|
377.0 | [0..109] | [434..39] |
|
|
373.0 | [0..126] | [434..39] |
|
|
370.0 | [0..1] | [434..1] |
|
|
322.0 | [0..79] | [419..120] |
|
|
308.0 | [0..151] | [434..1751] |
|
|
260.0 | [0..151] | [433..47] |
|
|
145.0 | [0..3] | [191..828] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MKKGAKRKGV SKAGRKAAVA ETQNDEVIEE TTKTTQEESQ QHEEEVVDEV KENGEEEEAK 60
61 GDQEEEEDAK PDSLEEDEEN QEDEVKAEEV KEEVEKKPVA RRGGKRKRAT KKDTEIKDEK 120
121 KPVPKAKKPR AAKVKEEPVY FEEKRSLEDL WKVAFPVGTE WDQLDALYEF NWDFQNLEEA 180
181 LEEGGKLY
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [189-323] |
1 11 21 31 41 51
| | | | | |
1 GKKVYVFGCT EPQLVPYKGA NKIVHVPAVV VIESPFPPSD KIGITSVQRE VEEIIPMKKM 60
61 KMDWLPYIPI EKRDRQVDKM NSQIFTLGCT QRRSALRHMK EDQLKKFEYC LPYFYQPFKE 120
121 DELEQSTEVQ IMFPS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.425 | a.39.1 | EF-hand |
| View | Download | 0.425 | a.39.1 | EF-hand |
| View | Download | 0.408 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.408 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.398 | d.95.2 | Homing endonucleases |
| View | Download | 0.398 | d.95.2 | Homing endonucleases |
| View | Download | 0.377 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.377 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.370 | g.39.1 | Glucocorticoid receptor-like (DNA-binding domain) |
| View | Download | 0.323 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.262 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.236 | d.227.1 | OsmC-like |
| View | Download | 0.217 | d.110.4 | SNARE-like |
| View | Download | 0.205 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [324-434] |
1 11 21 31 41 51
| | | | | |
1 EPPVVCEFDW EFDELQEFVD KLVEEEALPA EQADEFKEYV KEQVRAAKKA NREAKDARKK 60
61 AIEEMSEDTK QAFQKMKFYK FYPQPSPDTP DVSGVQSPFI NRYYGKAHEV L
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.689 | N/A | N/A | a.246.1 | Description not found. |
| View | Download | 0.593 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.590 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.564 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.544 | N/A | N/A | a.47.5 | Description not found. |
| View | Download | 0.508 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.476 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.442 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.384 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.351 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
