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View Structure Prediction Details

Protein: AT101_ARATH
Organism: Arabidopsis thaliana
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AT101_ARATH.

Description E-value Query
Range
Subject
Range
gi|9758143 - gi|9758143|dbj|BAB08635.1| unnamed protein product [Arabidopsis thaliana]
249.0 [0..12] [190..63]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCEVCQLKE LEVESFEIRE VLRCILHTIV FHRALGLIRP KDIDLELFEI TYVQCGEIEV  60
   61 EKKIDEKIEQ FINWIEKHPN KKSQICLSFY EVKSKQPSWF TKIERLYWEQ WYINLNVLQP 120
  121 TKPPVGKSHH SKLVMDPGEA SEERSSRRTL LEQSLQEVLF QIIKFVNEKK DHVPPINDGV 180
  181 IYYPFEITIP SSSDSAFGMD MFKRILHSGH PSMLG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 1s2hA
Description: The Mad2 spindle checkpoint protein possesses two distinct natively folded states
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.69378184514375 bayes_pls_golite062009
protein binding 0.841515803184277 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle