| Protein: | GRIP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 788 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRIP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..2] | [783..2041] |
|
|
346.0 | [0..3] | [781..1043] |
|
|
346.0 | [0..3] | [772..1144] |
|
|
345.0 | [0..3] | [781..1043] |
|
|
345.0 | [0..3] | [781..1043] |
|
Region A: Residues: [1-272] |
1 11 21 31 41 51
| | | | | |
1 MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG 60
61 LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV EKQTRVAAEQ ALEHLREAYS 120
121 EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD 180
181 ARFREVNETA ERASSQHSSM QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR 240
241 GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQ
|
| Detection Method: |  |
| Confidence: | 10.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [273-358] |
1 11 21 31 41 51
| | | | | |
1 AVEERKQIAV TELSAKHQKN LEGLEAQVVD ALSERDKAAE TISSLQVLLA EKESKIAEME 60
61 AAATGEAARL RAAAETLKGE LAHLKS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [359-688] |
1 11 21 31 41 51
| | | | | |
1 ENEKEKETWE ASCDALKSKL EIAESNYLQA EIEVAKMRSQ LGSEMSMQTQ ILSTKDAELK 60
61 GAREEINRLQ SEFSSYKIRA HALLQKKDME LAAAKDSEQI KSLEEALKEA EKEVYLVSAE 120
121 RDRAQQDLQS ALASLEKELE ERAGALKDAS EQIKSLEVKL DSTVARNQAE KQAWEEDLRV 180
181 LEETWRRRCE ALTAQNEASP AEGIEKELEN AKLRNKRMKE EHESVRELAD RLIEEKDREI 240
241 SRLVDEMTNL RKSMESKPVW NKSPSQVHHY GNNNTESQQQ DVSNLSTSAA EHQILILARQ 300
301 QAQREEELAQ TQRHILALQE EIEELERENR
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [689-788] |
1 11 21 31 41 51
| | | | | |
1 LHSQQEAVLK TELREMERKQ KREGVDMTYL KNVILKLLET GEVEALLPVV GMLLQFSPEE 60
61 IQKCQQAYHS STTAATTTEA TPSPASEGSG LSVFSRFSFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.901 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.901 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.807 | a.277.1 | Description not found. |
| View | Download | 0.748 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.744 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.679 | a.39.3 | Cloroperoxidase |
| View | Download | 0.615 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.600 | a.118.14 | FliG |
| View | Download | 0.588 | a.118.14 | FliG |
