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View Structure Prediction Details

Protein: TPPJ_ARATH
Organism: Arabidopsis thaliana
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPPJ_ARATH.

Description E-value Query
Range
Subject
Range
gi|71000709, gi|... - gi|71000709|ref|XP_755036.1| alpha,alpha-trehalose-phosphate synthase subunit Tps2 [Aspergillus fumi...
gi|159128050 - gi|159128050|gb|EDP53165.1| alpha,alpha-trehalose-phosphate synthase subunit TPS2, putative [Aspergi...
247.0 [0..2] [370..579]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS  60
   61 QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.30103
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [102-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMFERIIEEA RGKQIVMFLD YDGTLSPIVD DPDRAFMTSK MRRTVKKMAK CFPTSIVTGR  60
   61 CIDKVYSFVK LAELYYAGSH GMDIKGPTKG FSRYNKDKPS VLYQPAGDFL PMIDEVYKQL 120
  121 VEKTKSTPGA KVENNKFCLS VHFRCVDEKK WSELASKVRS VVKNYPTLKL SQGRKVFEIR 180
  181 PIIKWNKGKA LEFLLESLGF ENCNDVFPIY IGDDKTDEDA FKLLRGRGQG FGILVSKFPK 240
  241 DTSASYSLQD PPEVMNFLGR LVEWKQMQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.154902
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.92340854382984 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle