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View Structure Prediction Details

Protein: gi|42573798, gi|...
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573798, gi|....

Description E-value Query
Range
Subject
Range
CE27565 - status:Confirmed UniProt:O45064 protein_id:AAC02568.2
135.0 [0..17] [259..35]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATANGAKSP SSMGPKVLFY SILLTLQYGA QPLISKRCIR KDVIVTSSVL TCEIVKVICA  60
   61 LILMARNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLKGLAKEWT LMGSLTASGL PAAIYALQNS LLQISYRSLD SLTFSILNQT KIFFTAFFTF  60
   61 IILRQKQSIL QIGALCLLIM AAVLLSVGEG SNKDSSGINA 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.35
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [169-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQKLFYGIIP VLAASVLSGL ASSLCQWASQ VKKHSSYLMT VEMSIVGSLC LLVSTLKSPD  60
   61 GEAIKKYGFF HGWTALTLVI NYLFFLSTKQ FF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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