| Protein: | B3GTJ_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 681 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GTJ_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
855.0 | [0..1] | [681..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MRKPKLSKLE RLEKFDIFVS LSKQRSVQIL MAVGLLYMLL ITFEIPFVFK TGLSSLSQDP 60
61 LTRPEKHNSQ RELQERRAPT RPLKSLLYQE SQSESPAQGL RRRTR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-423] |
1 11 21 31 41 51
| | | | | |
1 ILSSLRFDPE TFNPSSKDGS VELHKSAKVA WEVGRKIWEE LESGKTLKAL EKEKKKKIEE 60
61 HGTNSCSLSV SLTGSDLLKR GNIMELPCGL TLGSHITVVG KPRAAHSEKD PKISMLKEGD 120
121 EAVKVSQFKL ELQGLKAVEG EEPPRILHLN PRLKGDWSGK PVIEQNTCYR MQWGSAQRCE 180
181 GWRSRDDEET VDGQVKCEKW ARDDSITSKE EESSKAASWW LSRLIGRSKK VTVEWPFPFT 240
241 VDKLFVLTLS AGLEGYHVSV DGKHVTSFPY RTGFTLEDAT GLTINGDIDV HSVFAGSLPT 300
301 SHPSFSPQRH LELSSNWQ
|
| Detection Method: | |
| Confidence: | 4.26 |
| Match: | 1gzwA |
| Description: | X-RAY CRYSTAL STRUCTURE OF HUMAN GALECTIN-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.578674354263449 | bayes_pls_golite062009 |
|
Region A: Residues: [424-681] |
1 11 21 31 41 51
| | | | | |
1 APSLPDEQVD MFIGILSAGN HFAERMAVRR SWMQHKLVKS SKVVARFFVA LHSRKEVNVE 60
61 LKKEAEFFGD IVIVPYMDSY DLVVLKTVAI CEYGAHQLAA KFIMKCDDDT FVQVDAVLSE 120
121 AKKTPTDRSL YIGNINYYHK PLRQGKWSVT YEEWPEEDYP PYANGPGYIL SNDISRFIVK 180
181 EFEKHKLRMF KMEDVSVGMW VEQFNNGTKP VDYIHSLRFC QFGCIENYLT AHYQSPRQMI 240
241 CLWDKLVLTG KPQCCNMR
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 2j0aA |
| Description: | No description for 2j0aA was found. |
