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View Structure Prediction Details

Protein: PUB51_ARATH
Organism: Arabidopsis thaliana
Length: 796 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB51_ARATH.

Description E-value Query
Range
Subject
Range
gi|9758471 - gi|9758471|dbj|BAB09000.1| unnamed protein product [Arabidopsis thaliana]
499.0 [0..1] [796..19]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDGALIVAV AIKGNNSKTK GVVRWALQEF ASQEHVVFKL LHVQPRDSNS VSTTRKDLTT  60
   61 SVYKKDVDRK TREMLLPSRD MFVHREVQLD IMVLESDDIA DAISKAVQDH GISELVIGAS 120
  121 SSIIFSWKLK RSNLSSRIAD ATPRFCSVHV ISKGKLLNVR KSDMDTETSI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2gm3A
Description: No description for 2gm3A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [171-711]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADDRSESRFS SDSHSGTVSS TSSHQFSSTP LLFQRIQALT TVNQKVGTNI GKQNNEPHHH  60
   61 HHNRAGSLDV DESKLLNQKG FYRTSSSGIG YGGSDISSWR SSQMEEASSS STYSDPTSSS 120
  121 SQIHKDFELE KLKIELRHIK GMYAVAQSEV IDASKKMQDL NQRRSEEATR LKNLTIREEE 180
  181 ADEVVEMERE RQEDAENEAE LVRECIERET EERLEAEARA EEVRKEKQRL EDALEGGPLQ 240
  241 RQQYMKFEWE EIVEATSSFS DELKIGVGGY GSVYRCNLHH TTVAVKVLHS DKSSLTKQFH 300
  301 QELEILSKIR HPHLLLLLGA CPERGSLVYE YMHNGSLEER LMKRRPNVDT PQPPPLRWFE 360
  361 RFRIAWEIAS ALYFLHTNEP RPIVHRDLKP ANILLDRNNV SKIGDVGLSK MVNLDPSHAS 420
  421 TVFNETGPVG TFFYIDPEYQ RTGVVTPESD IYAFGIILLQ LVTARSAMGL AHSIEKALRD 480
  481 QTGKFTEILD KTAGDWPVKE AKEMVMIGLR CAEMRKRDRP DLGKEILPVL ERLKEVASIA 540
  541 R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.0
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.686492203566958 bayes_pls_golite062009
transferase activity 0.66841261245817 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.66326000691279 bayes_pls_golite062009
kinase activity 0.65753777854807 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.64444215862273 bayes_pls_golite062009
protein kinase activity 0.56587465829201 bayes_pls_golite062009
binding 0.0554152720226 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [712-796]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMFADNLIDH HHNAPTHFYC PITKDVMENP CVASDGYTYE KRAIKEWLQK NHKSPMTDLP  60
   61 FPSDSLLPNH SLLSAIKEWR SQLIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1xjdA
Description: Crystal Structure of PKC-theta complexed with Staurosporine at 2A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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