| Protein: | gi|30697452 |
| Organism: | Arabidopsis thaliana |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30697452.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..1] | [437..1] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MAQQEASPSP GAEVVGRAFV EQYYHILHQS PGLVHRFYQD SSFLTRPDVT GAVTTVTTMQ 60
61 AINDKILSLK YEDYTAEIET ADAQESHERG VIVLVTGRLT GNDNVRKKFS QSFFLAPQDK 120
121 GYFVLNDVFR FLEEKEVTAQ ARSV
|
| Detection Method: |  |
| Confidence: | 37.0 |
| Match: | 1a2kA |
| Description: | Nuclear transport factor-2 (NTF2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.02236648440434 | bayes_pls_golite062009 |
| binding | 0.734272307307889 | bayes_pls_golite062009 |
| protein transporter activity | 0.48055198672045 | bayes_pls_golite062009 |
| transporter activity | 0.258106613266757 | bayes_pls_golite062009 |
|
Region A: Residues: [145-389] |
1 11 21 31 41 51
| | | | | |
1 PINGTTRDVQ APIEPERVVV SHEPEVEPEP VASIEEEDLD NVAEVYDPSD KDEGVVVDVE 60
61 PIEPPTQISH NEILSVPQGD APKHSYASIL KQMKSSPAPT THVARNKPRP APVNQKLTAP 120
121 PAEPAARPEA SAHENVPNSS HVDVEDDGHS IYVRNLPFDS TPTQLEEVFK NFGAIKHEGI 180
181 QVRSNKQGFC FGFVEFETSS GKQSALEASP VTIGDRQAVV EEKKTNSRGG GNNGGSRGRY 240
241 FSGRG
|
| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.10830442385058 | bayes_pls_golite062009 |
| binding | 1.8541691379227 | bayes_pls_golite062009 |
| protein binding | 0.802085345859498 | bayes_pls_golite062009 |
| nucleic acid binding | 0.727288287394927 | bayes_pls_golite062009 |
| mRNA binding | 0.0988424523768603 | bayes_pls_golite062009 |
|
Region A: Residues: [390-459] |
1 11 21 31 41 51
| | | | | |
1 SFRNESFKGG RGGGGRGGYG RGGGEFSGRP KSSNPRNGGE GYQRVPQNGG GGRGGRGEGG 60
61 RGGARGGGSS
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
