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View Structure Prediction Details

Protein: P4KB2_ARATH
Organism: Arabidopsis thaliana
Length: 1116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for P4KB2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMAQFLSLV RGDSIESPRE ITSPSNLISE SGSNGWLIRF FDSSFFCEWI AVSYLYKHQH  60
   61 SGVRDYLCNR MYTLPLSGIE SYLFQICYLM VHKPSPSLDK FVIDICAKSL KIALKVHWFL 120
  121 LAELEDSDDN EGISRIQEKC QIAATLVGEW SPLMRPHNEP STPGSKVLNK FLSSKQKLFS 180
  181 LTLSPPTQKS LLFSPTSGSN LQDDGSQLSA DDNKIFKRLI PSPKVRDALL FRKSADKEDE 240
  241 ECEKDGFFKR LLRDSRGEDD EQRSNSEGFF KRLLKDNKSE EEEISNNSEG FFKRLRSSKG 300
  301 DEEELTSSSD GFFKRLLRDN KGDEEELGAN SEGFFKKLLR DSKNEDEEPN ANTEGFFKKL 360
  361 FHESKNEDDK VSNAVDDEEK DGFLKKLFKE KFDEKRNGNE RNETDETVYT DETSGED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.045757
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [418-1116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGREGFFKKL FKEKFEDKPN IGKADDGNES EDDESSEFSL FRRLFRRHPE DVKTTLPSEN  60
   61 CSNGGFVESS PGTENFFRKL FRDRDRSVED SELFGSKKYK EKCPGSPKPQ NNTPSKKPPL 120
  121 PNNTAAQFRK GSYHESLEFV HALCETSYDL VDIFPIEDRK TALRESIAEI NSHLAQAETT 180
  181 GGICFPMGRG VYRVVNIPED EYVLLNSREK VPYMICVEVL KAETPCGAKT TSTSLKLSKG 240
  241 GIPLANGDAF LHKPPPWAYP LSTAQEVYRN SADRMSLSTV EAIDQAMTHK SEVKLVNACL 300
  301 SVETHSNSNT KSVSSGVTGV LRTGLESDLE WVRLVLTADP GLRMESITDP KTPRRKEHRR 360
  361 VSSIVAYEEV RAAAAKGEAP PGLPLKGAGQ DSSDAQPMAN GGMLKAGDAL SGEFWEGKRL 420
  421 RIRKDSIYGN LPGWDLRSII VKSGDDCRQE HLAVQLISHF FDIFQEAGLP LWLRPYEVLV 480
  481 TSSYTALIET IPDTASIHSI KSRYPNITSL RDFFDAKFKE NSPSFKLAQR NFVESMAGYS 540
  541 LVCYLLQIKD RHNGNLLMDE EGHIIHIDFG FMLSNSPGGV NFESAPFKLT RELLEVMDSD 600
  601 AEGLPSEFFD YFKVLCIQGF LTCRKHAERI ILLVEMLQDS GFPCFKGGPR TIQNLRKRFH 660
  661 LSLTEEQCVS LVLSLISSSL DAWRTRQYDY YQRVLNGIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 1e7vA
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle