| Protein: | gi|42573674, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 215 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573674, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
171.0 | [0..1] | [215..1] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MAEKVHEIAG KITPFCRKIV HVNRKWRIIE RVSIFGDFFR FLWRKIVSCS SIIEKPILYR 60
61 RIVHKISSTA GDIFDGDDDT TTEPTVSGRR FGS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.962 | a.47.2 | t-snare proteins |
|
Region A: Residues: [94-215] |
1 11 21 31 41 51
| | | | | |
1 SSDSDLVSLK ISLLGDCQTG KTTFVVKYVG DENQSFLEMT GLNLMDKTFY VQGVTISFSI 60
61 WDVGGDEKRS KDHIPIACKD AVAILFMFDL TSRSTLNSVF GWYSQARKWN KVRLISMFLA 120
121 SE
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2folA |
| Description: | Crystal structure of human RAB1A in complex with GDP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
