| Protein: | gi|119935825, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119935825, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
579.0 | [0..1] | [419..52] |
|
|
294.0 | [0..3] | [417..60] |
|
|
163.0 | [0..3] | [417..69] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MTLMKALAHR NKLVELSGIE IQKLRINLRS VQEKNLQLAQ ANSQMLAELN TNRDRLKDLQ 60
61 HELGCKNALL KVKKHLEEQV LPRTHHESKD KVSAS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.825 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.813 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.725 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.689 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.617 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.607 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.572 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.562 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.480 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.475 | N/A | N/A | a.19.1 | Fertilization protein |
|
Region A: Residues: [96-318] |
1 11 21 31 41 51
| | | | | |
1 ASDGDCKSFQ VHDIKHKDTK RKRTTRIKSS VSADVKPIPV NDSNSKANRK RRVSGVIDTT 60
61 GIPEEICQTE DDIDKGVVSR GVNQDIDNVV NKKFVPDAAN PVKESVHRKR QCTRRQSTRF 120
121 DVQETKQTEK LLEMDGAKES KETASFSLRR RSARLRHEEA EPCKSLHEGD EVRETIKRRR 180
181 VSLRLSARFD IQEPHVTETS NADDARSIVI EESAGSRSES VEP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [319-419] |
1 11 21 31 41 51
| | | | | |
1 SESRHETKEI TRKRSFSTRR QSTKGKSQTD EAIKEIATDP SLVNTIVQEC DQETESKDKP 60
61 KADENEGMTR RSSVGRPSRH AAEKVQSYRE VSLRVKMRRK C
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.681 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.665 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.655 | a.2.14 | Description not found. |
| View | Download | 0.652 | d.95.2 | Homing endonucleases |
| View | Download | 0.652 | d.95.2 | Homing endonucleases |
| View | Download | 0.604 | d.95.2 | Homing endonucleases |
| View | Download | 0.551 | d.95.2 | Homing endonucleases |
| View | Download | 0.551 | d.95.2 | Homing endonucleases |
| View | Download | 0.454 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
