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View Structure Prediction Details

Protein: PLR1_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|53765455, gi|... - gi|75906333|ref|YP_320629.1| aldo/keto reductase [Anabaena variabilis ATCC 29413], gi|75700058|gb|AB...
319.0 [0..35] [365..2]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ  60
   61 LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN GQSERLLGKF IKESQGLKGK 120
  121 QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD 180
  181 GLVQMYEKGL VRAVGVSNYG PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI 240
  241 CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK 300
  301 TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN 360
  361 IFQTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.221849
Match: 1lqaA
Description: Tas protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aldo-keto reductase activity 2.57303336304449 bayes_pls_golite062009
catalytic activity 1.68179794468736 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.48881830724998 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.47641884930911 bayes_pls_golite062009
oxidoreductase activity 1.17915737521094 bayes_pls_golite062009
aldehyde reductase activity 1.16639404121425 bayes_pls_golite062009
binding 0.750554688914866 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle