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View Structure Prediction Details

Protein: BGL39_ARATH
Organism: Arabidopsis thaliana
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGL39_ARATH.

Description E-value Query
Range
Subject
Range
gi|116309769 - gi|116309769|emb|CAH66811.1| OSIGBa0135C13.6 [Oryza sativa (indica cultivar-group)]
488.0 [0..1] [439..7]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRALGLVL LLAVETCKAE EITCEETKPF TCNQTDRFNR KHFDDDFIFE GGKGRGLNVW  60
   61 DGFTHRYPEK GGPDLGNGDS TCGSYEHWQK DIDVMTELGV DGYRFSLAWS RIAPRESNQA 120
  121 GVKYYNDLID GLLAKNITPF VTLFHWDLPQ VLQDEYEGFL NHEIIDDFKD YANLCFKIFG 180
  181 DRVKKWITIN QLYTVPTRGY AMGTDAPEPY IVAHNQLLAH AKVVHLYRKK YKPKQRGQIG 240
  241 VVMITRWFVP YDSTQANIDA TERNKEFFLG WFMEPLTKGK YPDIMRKLVG RRLPKFNKKE 300
  301 AKLVKGSYDF LGINYYQTQY VYAIPANPPN RLTVLNDSLS AFSYENKDGP IGPWFNADSY 360
  361 YHPRGILNVL EHFKTKYGNP LVYITENGEL LILSGCNVKG YFAWCLGDNY ELWPSRSFHV 420
  421 SPFYLLHRKD KGAFPSFEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1myrA
Description: MYROSINASE FROM SINAPIS ALBA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.03213713925196 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.00088487541785 bayes_pls_golite062009
hydrolase activity 2.8082530579777 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
chitinase activity 0.700083867878222 bayes_pls_golite062009
glucosidase activity 0.528679164808812 bayes_pls_golite062009
hexosaminidase activity 0.220458268933622 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle