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View Structure Prediction Details

Protein: FH9_ARATH
Organism: Arabidopsis thaliana
Length: 782 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FH9_ARATH.

Description E-value Query
Range
Subject
Range
gi|8978340 - gi|8978340|dbj|BAA98193.1| unnamed protein product [Arabidopsis thaliana]
558.0 [0..1] [782..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNFWFAIFF FLLTCAPPSP LSYASTVTLS RRLLYDYESP LPLPLSPISP PFFPLESSPP  60
   61 SPPPPLPPTP PTTFAVFPTF PANISALVLP RSSKPHHTSP TLLLPALSAV LVIATVIGLA 120
  121 LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI 180
  181 RTGGTFFLKQ DSPEIRPLPP LPPRSFHHNN YETEVNEEDE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP  60
   61 SPERLRVRKN YNGNGSSSLR MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS 120
  121 TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP 180
  181 TRPPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [406-782]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVPPSQPFVV QNDVKKQSFS DQPPKQLHWE RLRSSSSKLS KEMVETMFIA NSSNPRDLPI  60
   61 QNQVLDPRKA QNIATLLQLL NLSTKDVCQA LLDGDCDVLG AELLECLSRL APSKEEERKL 120
  121 KSFSDGSEIG PAERFLKELL HVPFVFKRVD ALLFVANFHS EIKRLRKSFS VVQVACEELR 180
  181 NSRMFSILLE AILKTGNMMS VRTNRCGDAD AFKLDTLLKL VDVKGLDGRS SLLHFVVQEM 240
  241 MKSEGSVRAL EGIRNLNTEL SNVKKSADIE YGVLRSNVSR ICQGLKNIEA LLLLSEESGS 300
  301 YGDQWLKFKE RMTRFLKTAA EEIVKIKIRE SSTLSALEEV TEQFHGDASK EGHTMRIFMI 360
  361 VRDFLSVLDQ VCKEMGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 2j1dG
Description: No description for 2j1dG was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle