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View Structure Prediction Details

Protein: gi|30693486
Organism: Arabidopsis thaliana
Length: 607 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30693486.

Description E-value Query
Range
Subject
Range
gi|30693481, gi|... - gi|30693481|ref|NP_851107.1| structural constituent of ribosome [Arabidopsis thaliana], gi|21436077|...
832.0 [0..1] [607..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIELENSGIE DEEEVSESPK LVFKFAFQTE TFERLSREGY RSLSDDCGVE SESSFLSSDS  60
   61 SPVIFTAAAR KYETPSAKNL TFVLENPKAA TFRVEDCLKE KQEKTEDLGY SVFHGEDKVK 120
  121 TEDYSVSSFK KKKIRFLTEE DFLESDSDFV DSSQTFTSND ED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFLSDSDFAE TSLKKGQNRK SDNSGSGSDS EEEEEEDTNG FESLWEHQDL IEQLKMEMKK  60
   61 VKAIGGLT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [231-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TILEEEEEDD DCPKIMEDLK PWRIEEEKKF KHVDTIGEVH KFHRSYRERM RKLDILSFQK  60
   61 SYALGLLQSK SPQQATSTLG SNPSQTSFSS VFSVNIRLWK AKKSEIEPMV QFVKEIQGEL 120
  121 ENVYVGQMCL SWEILHWQYE KAIELLESDV YGSRRYNEVA GEFQQFQVLL QRFLENEPFE 180
  181 EPRVQHYIKR RCVLRNLLQI PVIREDGNKD KKNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [445-607]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRRDYEENND GVIKSDQLVE IMEETIRLFW RFVRCDKLTS SIHDQKSRTK SQIEPDHEED  60
   61 SEDLEMFAEV KSQLQNVSEK RLRDVLKSER CIIRRFQKHK EEDSTEDQVL HFFSQVDMKL 120
  121 VTRVLNMSKL TRDHLVWCHN KLTKINFVNR RLHLDPSFCL FPC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle