| Protein: | gi|15242470 |
| Organism: | Arabidopsis thaliana |
| Length: | 1242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242470.
| Description | E-value | Query Range |
Subject Range |
|
|
385.0 | [0..754] | [1224..98] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MCPKNQGLAD YVLQKKQEKH CLYWGCNNNN IRDFGRLSSE PRLNRKSRKT KCRNGRGDDF 60
61 GLGGDVVLGN DFGQNNNSGQ GNDFGQGNDS GQGNDSLCLS ANLLWISLLP NSASDGHIFQ 120
121 GEPELAQTEL SWVNSDFDTS FELSPHFILI FASSPKIGRV EAQDGYLPGK NLEVVLRGRV 180
181 SCDPFDLMIC HRAETCYFGW QYFAKVALPW RGVGRALRAK PQVTLSVDPL VP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [233-433] |
1 11 21 31 41 51
| | | | | |
1 RPKAVEPMMV SWCRAGDYYA VVGVGFVACF RAASLRRTFH AGDVEFGRFC YRAMRMSPSN 60
61 AIAAWRKRDS ALPDEEVWAF HVEDVKMSCG GLAILFRCGS GLRLTLWVHC GQQEYASVVE 120
121 TDSTYFLGAA LVSGLPCGCF EIDKNMQARP RLICSVACEL MLSAVDPSRP SLLQSRYKRL 180
181 ARCKASSKVD GRAMIRSSRN R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [434-663] |
1 11 21 31 41 51
| | | | | |
1 ETNINAFRRS PIAASSLIAM FETTFLNLSI NVLSAPSIAS SVEKCAPLIA MYIDLRKIFG 60
61 SLWHDAFWRT SLLLPRSIVQ ARDRGVGFHR RQVPDVRQIV TARQIVGAEQ VVAVLQVVAA 120
121 LQVVGALQVV VVLQVVAPLQ VVAVLQVVAV LQVVAVLQVA VILWATARML VNESYDKRRW 180
181 SAASGLRVFW DWSSWRLLSI LIFMRLGGAF SASKSLDLTL GSDLCCHKSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [664-745] |
1 11 21 31 41 51
| | | | | |
1 NPFDRSCFLS VEPIKDAIAS SAAVAARAVG AAGGYRLSPE PRLNRKSRKT KCRNGRGDDF 60
61 GLGGDVGLGN DFRQGNNSGQ GN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [746-870] |
1 11 21 31 41 51
| | | | | |
1 DFGQGARPMS NKRDHKPKGL SEYQEMKFVK AYRNVCDAKD SIDTLKDLSK IKGFGKYMVK 60
61 LMQGYFVTGA ASSEQEALPG NRAGKKAKGS EPYKPQRNTA AYALLTLHRP EKGKGKAGLG 120
121 TSKRE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [871-964] |
1 11 21 31 41 51
| | | | | |
1 WYSGWSCMSK LIEKGLVVKF SNPAKYMLTV EGRNVADDLD PRSRGQSSIP AGPSSRAQEF 60
61 LATDTGQVDL EGSRAKKFRS SSPCSSSISH ALKA
|
| Detection Method: | |
| Confidence: | 12.09691 |
| Match: | 1wp9A |
| Description: | Crystal structure of Pyrococcus furiosus Hef helicase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [965-1242] |
1 11 21 31 41 51
| | | | | |
1 CSSSLASDGT EGVTTIPRLP PLRFGEAFEE VYDVILILDD REQFATKGHK YQQDEYVLDF 60
61 IVERKNVDDM RSSIMDNRYK DQKLRLQRSG IKKLIYILEG DPNQSKTAES IKTACFTTEI 120
121 LEGFDVVRTN GLGETLRKYG YLTKSIYQYY KSLVNDDQRK VADSCPSYDD FVQRCPDLGK 180
181 MTISDVFAIQ LMQVLSLAKP SFGFLSATFF AIAVLDKYKT LRSLASAYSK LDNVSAQEEM 240
241 LRNQSNNVIC ASASKNIYKL VVLNDLYSIV CPFDLFVV
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 2bgwA |
| Description: | XPF from Aeropyrum pernix, complex with DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.286388432783973 | bayes_pls_golite062009 |
