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View Structure Prediction Details

Protein: gi|15240996
Organism: Arabidopsis thaliana
Length: 135 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240996.

Description E-value Query
Range
Subject
Range
SYN_HAEDU - Asparagine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=asnS PE=3 SV=1
SYN_HAEDU - Asparaginyl-tRNA synthetase OS=Haemophilus ducreyi GN=asnS PE=3 SV=1
133.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASSSTVQN LCSLSRTRIR SILCRPDGSR ISRELGKSFT FLEVNYGSCA ANLQVKIPLQ  60
   61 GKATKEMIEL NVEKFIDVGT VDHRSETPYS IPKSKLTLEY LRDHTYFRAR TSMIAAVTRI 120
  121 RHKMCLAAKN RGRTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 1eqrA
Description: Aspartyl-tRNA synthetase (AspRS); Prokaryotic AspRS, insert domain
Matching Structure (courtesy of the PDB):

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