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View Structure Prediction Details

Protein: gi|67633840, gi|...
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|67633840, gi|....

Description E-value Query
Range
Subject
Range
gi|9758486 - gi|9758486|dbj|BAB09032.1| unnamed protein product [Arabidopsis thaliana]
334.0 [0..26] [262..2]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRNVYEPLK TYFLKVNINC QGCKMKVKKT LRKIEGVYSV DIDTDQEAVI VRGNLDPEIL  60
   61 VKKLNKRGKH AQLMFLTPYH KDQY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1opzA
Description: A core mutation affecting the folding properties of a soluble domain of the ATPase protein CopA from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.246147507070597 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [85-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGNHQAVLNH DNRSLGNTQY NFGSNHNNVP SYERLNHQSD EEMMMMMNMK PVMMNDADYF  60
   61 EMSDSPEDFQ ELFGEIPQRH NNYEDVKPNL MRDMDLGYSN AYPAAETMNM QIGGRVNNMM 120
  121 VNERGFHGQM MNERGFHGQM MNGPSLVPQS MNHEQFSSRP VQSMNQQFSS RPVHGFYY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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