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View Structure Prediction Details

Protein: gi|15242802
Organism: Arabidopsis thaliana
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242802.

Description E-value Query
Range
Subject
Range
gi|49328085, gi|... - gi|50931731|ref|XP_475393.1| putative polyprotein [Oryza sativa (japonica cultivar-group)], gi|49328...
150.0 [0..3] [153..1001]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVQDIMKE AKAYCCFVDA SWVSPTECAG IGWVLYNDKA QMVLKGMASI PPTNSSIEAE  60
   61 AEALRSAMMQ VRRLGYEEVK FCVDASILYQ NVAPYLQKDK KACPTTNSPL AAYIQDIQKL 120
  121 ATISASFVVS KVNSTINDVA DHLAKVARSK KMQYVISWTH VS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 1rbrA
Description: STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.722279828632226 bayes_pls_golite062009
hydrolase activity 0.29272620969648 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.24934115119652 bayes_pls_golite062009
nuclease activity 0.239989310123501 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle