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View Structure Prediction Details

Protein: CDC26_ARATH
Organism: Arabidopsis thaliana
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC26_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
454.0 [0..4] [426..1203]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSIALALC LTHHSPMVLS IVDYGDSQEK TIDSLWKKPH GSDLTWSGFS RVGVTEAYFA  60
   61 VPVDHFLTNP PSLRLSQTIY CRRGSSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.09691
Match: 2hesX
Description: No description for 2hesX was found.

Predicted Domain #2
Region A:
Residues: [88-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VETEKVEEED RDDFLKQVWF LTDNLVFFFV DIEEYIVIEQ LGDTVYLWDA SSCYTSKLVT  60
   61 IDDENGPVTS INWTQDGLDL AVGLDNSEVQ VWDCVSNRHV RTLRGGHESR VGSLAWNNHI 120
  121 LTTGGMDGKI VNNDVRIRSS IIGTYVGHTE EVCGLKWSES GKKLASGGND NVVHIWDRSL 180
  181 ASSNPTRQWL HRFEEHTAAV RALAWCPFQA SLLATGGGVG DGKINFWNTH TGACLNSVET 240
  241 GSQVCSLLWS KSERELLSAH GFTQNQLTLW KYPSMVKMAE LNGHTSRVLF MAQSPDGCTV 300
  301 ASAAGDETLR LWNVFGEPPK TTKKAASKKY TEPFAHVNHI R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.154902
Match: 1vyhC
Description: PAF-AH Holoenzyme: Lis1/Alfa2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.145838346152539 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle