| Protein: | PME28_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 732 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME28_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
704.0 | [0..3] | [558..4] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MSYGYDDEDA KRKKRYVIIS ISSVLLISMV VAVTIGVSVN KSDNAGDEEI TTSVKAIKDV 60
61 CAPTDYKETC EDTLRKDAKD TSDPLELVKT AFNATMKQIS DVAKKSQTMI ELQKDPRAKM 120
121 ALDQCKELMD YAIGELSKSF EELGKFEFHK VDEALVKLRI WLSATISHEQ TCLDGFQGTQ 180
181 GNAGETIKKA LKTAVQLTHN GLAMVTEMSN YLGQMQIPEM
|
| Detection Method: |  |
| Confidence: | 17.30103 |
| Match: | 1x8zA |
| Description: | Crystal structure of a pectin methylesterase inhibitor from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [221-563] |
1 11 21 31 41 51
| | | | | |
1 NSRRLLSQEF PSWMDARARR LLNAPMSEVK PDIVVAQDGS GQYKTINEAL NFVPKKKNTT 60
61 FVVHIKEGIY KEYVQVNRSM THLVFIGDGP DKTVISGSKS YKDGITTYKT ATVAIVGDHF 120
121 IAKNIAFENT AGAIKHQAVA IRVLADESIF YNCKFDGYQD TLYAHSHRQF YRDCTISGTI 180
181 DFLFGDAAAV FQNCTLLVRK PLLNQACPIT AHGRKDPRES TGFVLQGCTI VGEPDYLAVK 240
241 EQSKTYLGRP WKEYSRTIIM NTFIPDFVPP EGWQPWLGEF GLNTLFYSEV QNTGPGAAIT 300
301 KRVTWPGIKK LSDEEILKFT PAQYIQGDAW IPGKGVPYIL GLF
|
| Detection Method: | |
| Confidence: | 126.0 |
| Match: | 1xg2A |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [564-732] |
1 11 21 31 41 51
| | | | | |
1 SGNGSTNSTV TGSSLSSNTT ESSDSPSTVV TPSTSPPAGH LGSPSDTPSS VVSPSTSLPA 60
61 GQLGAPPATP SMVVSPSTSP PAGHLGSPSD TPSSLVSPST SPPAGHLGSP SDTPSSVVTP 120
121 SASPSTSPSA SPSVSPSAFP SASPSASPSA SPSVSPSASP SASPQSSIG
|
| Detection Method: | |
| Confidence: | 1.51 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
