| Protein: | gi|15241054 |
| Organism: | Arabidopsis thaliana |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241054.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..1] | [147..248] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MDLAQWLEKA SENDHGTRGD TRAPVSGFRG GNEELMCLTI VQGNQEVLSI GGLMKNNKLR 60
61 FFGSISEHQV SVRIASGAT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.369 | a.4.1 | Homeodomain-like |
| View | Download | 0.352 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.352 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.340 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.338 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.338 | b.1.18 | E set domains |
| View | Download | 0.337 | g.7.1 | Snake toxin-like |
| View | Download | 0.337 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.291 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.281 | a.4.1 | Homeodomain-like |
| View | Download | 0.237 | a.4.1 | Homeodomain-like |
| View | Download | 0.237 | a.4.1 | Homeodomain-like |
| View | Download | 0.202 | b.1.18 | E set domains |
| View | Download | 0.201 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
|
Region A: Residues: [80-158] |
1 11 21 31 41 51
| | | | | |
1 NNFMSKDLAI YLKLPIKENN HILEDFLVLD VDKAEAEWIT FSDKDRKLST TKVKMRSENE 60
61 LKEDCGTAAY YYLEDKIPR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.929 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.915 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.900 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.842 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.822 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.798 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.727 | N/A | N/A | b.38.2 | YhbC-like, C-terminal domain |
| View | Download | 0.724 | N/A | N/A | g.17.1 | Cystine-knot cytokines |
| View | Download | 0.650 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.635 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.630 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.587 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.564 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [159-342] |
1 11 21 31 41 51
| | | | | |
1 ATGKVQNKDV QMEDSWFPPI WTMADHYECE PEQSQQQETH KSILVDIQTN QIEAAFLVEK 60
61 HYGETDEYLH LWVKMSDSQA GLEAGTPTRI PNKVPRYYTI SEGNFSKLVS PIKEQMLRSQ 120
121 AEKKSEGYGG RQDQKKLSHS TVEFTFYHHE DKVILIGGSI DRIASWASWA SWASYGYWFK 180
181 PVFP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
