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View Structure Prediction Details

Protein: LACS7_ARATH
Organism: Arabidopsis thaliana
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS7_ARATH.

Description E-value Query
Range
Subject
Range
gi|20805875 - gi|20805875|gb|AAM28874.1|AF503757_1 long chain acyl-CoA synthetase 7 [Arabidopsis thaliana]
628.0 [0..1] [700..1]

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Predicted Domain #1
Region A:
Residues: [1-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFASPEQRR LETIRSHIDT SPTNDQSSSL FLNATASSAS PFFKEDSYSV VLPEKLDTGK  60
   61 WNVYRSKRSP TKLVSRFPDH PEIGTLHDNF VHAVETYAEN KYLGTRVRSD GTIGEYSWMT 120
  121 YGEAASERQA IGSGLLFHGV NQGDCVGLYF INRPEWLVVD HACAAYSFVS VPLYDTLGPD 180
  181 AVKFVVNHAN LQAIFCVPQT LNILLSFLAE IPSIRLIVVV GGADEHLPSL PRGTGVTIVS 240
  241 YQKLLSQGRS SLHPFSPPKP EDIATICYTS GTTGTPKGVV LTHGNLIANV AGSSVEAEFF 300
  301 PSDVYISYLP LAHIYERANQ IMGVYGGVAV GFYQGDVFKL MDDFAVLRPT IFCSVPRLYN 360
  361 RIYDGITSAV KSSGVVKKRL FEIAYNSKKQ AIINGRTPSA FWDKLVFNKI KEKLGGRVRF 420
  421 MGSGASPLSP DVMDFLRICF GCSVREGYGM TETSCVISAM DDGDNLSGHV GSPNPACEVK 480
  481 LVDVPEMNYT SDDQPYPRGE ICVRGPIIFK GYYKDEEQTR EILDGDGWLH TGDIGLWLPG 540
  541 GRLKIIDRKK NIFKLAQGEY IAPEKIENVY TKCRFVSQCF IHGDSFNSSL VAIVSVDPEV 600
  601 MKDWAASEGI KYEHLGQLCN DPRVRKTVLA EMDDLGREAQ LRGFEFAKAV TLVPEPFTLE 660
  661 NGLLTPTFKI KRPQAKAYFA EAISKMYAEI AASNPIPSKL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 145.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle