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View Structure Prediction Details

Protein: ATL31_ARATH
Organism: Arabidopsis thaliana
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL31_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536625 - gi|21536625|gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana]
267.0 [0..1] [368..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG  60
   61 FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET IETFPTFVY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEVKTQKIGK GALECAICLN EFEDDETLRL LPKCDHVFHP HCIGAWLQGH VTCPVCRTNL  60
   61 AEQTPEPEVV VETDLEAQQQ SAVPVPVVEL PRVKFPRSHT TGHSVVLPGE STDRFTLRVP 120
  121 EELRKKIM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [238-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANWKLNRSNS VFVLPRGGSS RSGKQVDRSR AKSDRWLFRK TPSFLWRNRD DGSIRLGGTG  60
   61 SVRGNSVTSP SGDSVRADRW AFLRNPSFLW RNTTPVPSPR VEVNNKDGEG TSSVQHIGTV 120
  121 GSTSGSLRLP V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle