| Protein: | gi|15240482 |
| Organism: | Arabidopsis thaliana |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240482.
| Description | E-value | Query Range |
Subject Range |
|
|
442.0 | [0..2] | [370..1] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MIKNDGKMMR VRIAKERSDL CDLTAAAIKA TYNTRNPCEV ERCIDVLNHL KSLSLSVKDI 60
61 ELSESIVKLE TLRSHRNPRI RKEAQALFHS WLKTFYAHGS DNSFKAALTK DRLKMKKHVL 120
121 TRCSELKKED EPGTIACQVT AFTLLKNKED ERFQTTVEAV E
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [162-259] |
1 11 21 31 41 51
| | | | | |
1 SKTTIKLSEL NKKEDQRSLT RETEMIKARN SFLALKQKED HKSETCDEKY FKKETKTNLK 60
61 PLNMKTRCVS LEDVTTKKPH EDGSLIKKTK TEKELKNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.834 | a.74.1 | Cyclin-like |
|
Region A: Residues: [260-370] |
1 11 21 31 41 51
| | | | | |
1 KVDEMVKLFE AAKKAADVAN AKGVLSGKPE ASRCINALSL LMKINITPKP KEPRSMMDKL 60
61 EGLTKHKDRK ICHVASALLH LWRQRIREQE RKKSVTKASS KNIQRRGNLV M
|
| Detection Method: | |
| Confidence: | 1.25 |
| Match: | 1wjtA |
| Description: | Solution structure of the N-terminal Domain I of mouse transcription elongation factor S-II protein 3 |
Matching Structure (courtesy of the PDB): |
|
