| Protein: | SDN5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 567 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDN5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..7] | [567..44] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MSSSKRKRGA ETAAEDCDDG TDKSNTGNSF FDIYGPEAKA ELDFKSPETT LNLQDVQGLV 60
61 TWVLAEGFMP SWVFIKNKPL IPKVVLLYLP GLDAALYLSH SKTLSSLKSC CGNPMALLAL 120
121 SCVVDEMRTI DTILTCKGRK KKTVTSSVEP PPLVSSPEAC NLMGKSFVEL TKDIPFPVSY 180
181 YTLSQKEMEQ NGYTFEKLEL TPTLPAP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-399] |
1 11 21 31 41 51
| | | | | |
1 SGSCPPEIVA LDCEMCITKE GLELTRVTLV DIQGQVLLDK LVMPTNPITD YNTRYSGITA 60
61 VMMEGVTTTL KDIQEEFLKL VFKETILVGH SLENDLLSLK ISHNLVIDTA VLYKHPHGRS 120
121 YKTKLRILAK KFLAREIQES ESGHDSAEDA KAAMDLALLK IKHGPDFGSP PEVIRKKLLA 180
181 VLNESGKTTS II
|
| Detection Method: | |
| Confidence: | 29.0 |
| Match: | 1wljA |
| Description: | human ISG20 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.722279828632226 | bayes_pls_golite062009 |
| hydrolase activity | 0.29272620969648 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.24934115119652 | bayes_pls_golite062009 |
| nuclease activity | 0.239989310123501 | bayes_pls_golite062009 |
|
Region A: Residues: [400-567] |
1 11 21 31 41 51
| | | | | |
1 DNINIVKRYA SESSNAIPVS SDDEALSKAV KEVKNKRSQF VWTQFSELNA HFQSRADDPQ 60
61 KLNSRLAEMI SLLTCNKKSG LKKSNVSPET KEILKKMNER VQSLYAALPT NAMFIVCTGH 120
121 GDTSIVHRVR KMLKDEDEIG FDREKLVKVL EELQAQAEVA LCFVGIKQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
