| Protein: | ROGF5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROGF5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
943.0 | [0..1] | [611..1] |
|
|
805.0 | [0..62] | [558..34] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MENLVKSCAG IEKKRSNLTP SMEDILTESK ERSSTSGASY ESSSTTTVAS SSPPPPPSQI 60
61 LGWPIRKASF RKNSKESVNF DHKKL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.557 | d.52.8 | Description not found. |
| View | Download | 0.448 | a.29.8 | Description not found. |
| View | Download | 0.422 | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.359 | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.351 | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.327 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.249 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.235 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [86-492] |
1 11 21 31 41 51
| | | | | |
1 TLHDDSGFKA KEMNSADVEM MKERFAKLLL GEDMSGSGKG VCTALAISNA ITNLCATIFG 60
61 QLWRLEPLSS EKKEMWRREM EWILSVSDHI VELTPSTQTY PDGNKFEVMT CRPRFDLFIN 120
121 LPALRKLDNM LLDILASFKK TEFWYVDQGI VASENDGSAS FRRKIQRQEE KWWLPVPRLA 180
181 PNGLTEEART ELNHKRECAT QILKAAMAIN SLALTEMDVP KSYLETLPKN GRSCLGDVIY 240
241 RYVTSDKFSA ESLLDCLDLS SEHIALDIAN RVEASIYVWR RRVQTKLGVN NNTSSTTPKL 300
301 TWEMVKELMA AGDKRGLLVE RSETLLRCLK QRFPSLTQTS LDISKIQWNK DIGKSILESY 360
361 SRALESLASN IIARIDDLLY VDDLTKQSDD NNLLSSPAVS SIIAHKK
|
| Detection Method: | |
| Confidence: | 180.0 |
| Match: | 2ntxA |
| Description: | No description for 2ntxA was found. |
|
Region A: Residues: [493-611] |
1 11 21 31 41 51
| | | | | |
1 VVPLPYLISA SGTPYRTSFS TTPGFSPSMI SPKKGERRTP YSSKDTNKII EKGLPSRGYG 60
61 VRRVLNNYLG MESKLKICVN PSDNADTAVI NQISKDVEEE KKRNSTSVHQ KGPPKYTVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | a.77.1 | DEATH domain |
| View | Download | 0.278 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.278 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.264 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.257 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.233 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.233 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
