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View Structure Prediction Details

Protein: METE3_ARATH
Organism: Arabidopsis thaliana
Length: 812 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for METE3_ARATH.

Description E-value Query
Range
Subject
Range
gi|47600745 - gi|47600745|emb|CAE55865.1| cobalamin-independent methionine synthase [Arabidopsis thaliana]
924.0 [0..1] [812..1]
METE_MESCR - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallin...
912.0 [0..49] [812..1]
gi|33325957 - gi|33325957|gb|AAQ08403.1| methionine synthase [Glycine max]
909.0 [0..49] [811..1]
gi|115361539 - gi|115361539|gb|ABI95860.1| methionine synthase [Nicotiana suaveolens]
908.0 [0..49] [812..1]
METE_CATRO - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE...
905.0 [0..49] [812..1]
gi|8439545 - gi|8439545|gb|AAF74983.1|AF082893_1 methionine synthase [Solanum tuberosum]
905.0 [0..49] [812..1]

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Predicted Domain #1
Region A:
Residues: [1-812]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQLALQRLQ PLASLPRRPP SLPPPSSATP SLPCATASRR PRFYVARAMS SHIVGYPRIG  60
   61 PKRELKFALE SFWDGKTNVD DLQNVAANLR KSIWKHMAHA GIKYIPSNTF SYYDQMLDTT 120
  121 AMLGAVPSRY GWESGEIGFD VYFSMARGNA SAHAMEMTKW FDTNYHYIVP ELGPDVNFSY 180
  181 ASHKAVVEFK EAKALGIDTV PVLIGPMTYL LLSKPAKGVE KSFCLLSLID KILPVYKEVL 240
  241 ADLKSAGARW IQFDEPILVM DLDTSQLQAF SDAYSHMESS LAGLNVLIAT YFADVPAEAY 300
  301 KTLMSLKCVT GFGFDLVRGL ETLDLIKMNF PRGKLLFAGV VDGRNIWAND LSASLKTLQT 360
  361 LEDIVGKEKV VVSTSCSLLH TAVDLVNEMK LDKELKSWLA FAAQKVVEVN ALAKSFSGAK 420
  421 DEALFSSNSM RQASRRSSPR VTNAAVQQDV DAVKKSDHHR STEVSVRLQA QQKKLNLPAL 480
  481 PTTTIGSFPQ TTDLRRIRRE FKAKKISEVD YVQTIKEEYE KVIKLQEELG IDVLVHGEAE 540
  541 RNDMVEFFGE QLSGFAFTSN GWVQSYGSRC VKPPIIYGDI TRPKAMTVFW SSMAQKMTQR 600
  601 PMKGMLTGPV TILNWSFVRN DQPRHETCFQ IALAIKDEVE DLEKAGVTVI QIDEAALREG 660
  661 LPLRKSEQKF YLDWAVHAFR ITNSGVQDST QIHTHMCYSN FNDIIHSIID MDADVITIEN 720
  721 SRSDEKLLSV FHEGVKYGAG IGPGVYDIHS PRIPSTEEIA ERINKMLAVL DSKVLWVNPD 780
  781 CGLKTRNYSE VKSALSNMVA AAKLIRSQLN KS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1u1hA
Description: A. thaliana cobalamine independent methionine synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle