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View Structure Prediction Details

Protein: SUSY1_ARATH
Organism: Arabidopsis thaliana
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SUSY1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANAERMITR VHSQRERLNE TLVSERNEVL ALLSRVEAKG KGILQQNQII AEFEALPEQT  60
   61 RKKLEGGPFF DLLKSTQEAI VLPPWVALAV RPRPGVWEYL RVNLHALVVE ELQPAEFLHF 120
  121 KEELVDGVKN GNFTLELDFE PFNASIPRPT LHKYIGNGVD FLNRHLSAKL FH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKESLLPLLK FLRLHSHQGK NLMLSEKIQN LNTLQHTLRK AEEYLAELKS ETLYEEFEAK  60
   61 FEEIGLERGW GDNAERVLDM IRLLLDLLEA PDPCTLETFL GRVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFNVVILSP HGYFAQDNVL GYPDTGGQVV YILDQVRALE IEMLQRIKQQ GLNIKPRILI  60
   61 LTRLLPDAVG TTCGERLERV YDSEYCDILR VPFRTEKGIV RKWISRFEVW PYLETYTEDA 120
  121 AVELSKELNG KPDLIIGNYS DGNLVASLLA HKLGVTQCTI AHALEKTKYP DSDIYWKKLD 180
  181 DKYHFSCQFT ADIFAMNHTD FIITSTFQEI AGSKETVGQY ESHTAFTLPG LYRVVHGIDV 240
  241 FDPKFNIVSP GADMSIYFPY TEEKRRLTKF HSEIEELLYS DVENKEHLCV LKDKKKPILF 300
  301 TMARLDRVKN LSGLVEWYGK NTRLRELANL VVVGGDRRKE SKDNEEKAEM KKMYDLIEEY 360
  361 KLNGQFRWIS SQMDRVRNGE LYRYICDTKG AFVQPALYEA FGLTVVEAMT CGLPTFATCK 420
  421 GGPAEIIVHG KSGFHIDPYH GDQAADTLAD FFTKCKEDPS HWDEISKGGL QRIEEKYTWQ 480
  481 IYSQRLLTLT GVYGFWKHVS NLDRLEARRY LEMFYALKYR PLAQAVPLAQ DD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.0
Match: 2r60A
Description: No description for 2r60A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle