| Protein: | gi|8071650, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 1165 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8071650, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
626.0 | [0..1] | [1165..1] |
|
|
526.0 | [0..8] | [429..4] |
|
|
525.0 | [0..16] | [404..1] |
|
|
521.0 | [0..2] | [401..34] |
|
|
520.0 | [0..3] | [388..22] |
|
|
510.0 | [0..21] | [545..37] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MKAPSSNGVS PNPVEGERRN INSELWHACA GPLISLPPAG SLVVYFPQGH SEQVAASMQK 60
61 QTDFIPSYPN LPSKLICMLH NVTLNADPET DEVYAQMTLQ PVNKYDRDAL LASDM
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [116-270] |
1 11 21 31 41 51
| | | | | |
1 GLKLNRQPNE FFCKTLTASD TSTHGGFSVP RRAAEKIFPA LDFSMQPPCQ ELVAKDIHDN 60
61 TWTFRHIYRG QPKRHLLTTG WSVFVSTKRL FAGDSVLFIR DGKAQLLLGI RRANRQQPAL 120
121 SSSVISSDSM HIGVLAAAAH ANANNSPFTI FYNPR
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [271-497] |
1 11 21 31 41 51
| | | | | |
1 WAAPAEFVVP LAKYTKAMYA QVSLGMRFRM IFETEECGVR RYMGTVTGIS DLDPVRWKNS 60
61 QWRNLQIGWD ESAAGDRPSR VSVWDIEPVL TPFYICPPPF FRPRFSGQPG MPDDETDMES 120
121 ALKRAMPWLD NSLEMKDPSS TIFPGLSLVQ WMNMQQQNGQ LPSAAAQPGF FPSMLSPTAA 180
181 LHNNLGGTDD PSKLLSFQTP HGGISSSNLQ FNKQNQQAPM SQLPQPP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [498-556] |
1 11 21 31 41 51
| | | | | |
1 TTLSQQQQLQ QLLHSSLNHQ QQQSQSQQQQ QQQQLLQQQQ QLQSQQHSNN NQSQSQQQQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [557-795] |
1 11 21 31 41 51
| | | | | |
1 QLLQQQQQQQ LQQQHQQPLQ QQTQQQQLRT QPLQSHSHPQ PQQLQQHKLQ QLQVPQNQLY 60
61 NGQQAAQQHQ SQQASTHHLQ PQLVSGSMAS SVITPPSSSL NQSFQQQQQQ SKQLQQAHHH 120
121 LGASTSQSSV IETSKSSSNL MSAPPQETQF SRQVEQQQPP GLNGQNQQTL LQQKAHQAQA 180
181 QQIFQQSLLE QPHIQFQLLQ RLQQQQQQQF LSPQSQLPHH QLQSQQLQQL PTLSQGHQF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [796-912] |
1 11 21 31 41 51
| | | | | |
1 PSSCTNNGLS TLQPPQMLVS RPQEKQNPPV GGGVKAYSGI TDGGDAPSSS TSPSTNNCQI 60
61 SSSGFLNRSQ SGPAILIPDA AIDMSGNLVQ DLYSKSDMRL KQELVGQQKS KASLTDH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [913-1165] |
1 11 21 31 41 51
| | | | | |
1 QLEASASGTS YGLDGGENNR QQNFLAPTFG LDGDSRNSLL GGANVDNGFV PDTLLSRGYD 60
61 SQKDLQNMLS NYGGVTNDIG TEMSTSAVRT QSFGVPNVPA ISNDLAVNDA GVLGGGLWPA 120
121 QTQRMRTYTK VQKRGSVGRS IDVNRYRGYD ELRHDLARMF GIEGQLEDPQ TSDWKLVYVD 180
181 HENDILLVGD DPWEEFVNCV QSIKILSSAE VQQMSLDGNF AGVPVTNQAC SGGDSGNAWR 240
241 GHYDDNSATS FNR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
