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View Structure Prediction Details

Protein: EFR_ARATH
Organism: Arabidopsis thaliana
Length: 1031 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for EFR_ARATH.

Predicted Domain #1
Region A:
Residues: [1-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSFSLVFN ALTLLLQVCI FAQARFSNET DMQALLEFKS QVSENNKREV LASWNHSSPF  60
   61 CNWIGVTCGR RRERVISLNL GGFKLTGVIS PSIGNLSFLR LLNLADNSFG STIPQKVGRL 120
  121 FRLQYLNMSY NLLEGRIPSS LSNCSRLSTV DLSSNHLGHG VPSELGSLSK LAILDLSKNN 180
  181 LTGNFPASLG NLTSLQKLDF AYNQMRGEIP DEVARLTQMV FFQIALNSFS GGFPPALYNI 240
  241 SSLESLSLAD NSFSGNLRAD FGYLLPNLRR LLLGTNQFTG AIPKTLANIS SLERFDISSN 300
  301 YLSGSIPLSF GKLRNLWWLG IRNNSLGNNS SSGLEFIGAV ANCTQLEYLD VGYNRLGGEL 360
  361 PASIANLSTT LTSLFLGQNL ISGTIPHDIG NLVSLQELSL ETNMLSGELP VSFGKLLNLQ 420
  421 VVDLYSNAIS GEIPSYFGNM TRLQKLHLNS NSFHGRIPQS LGRCRYLLDL WMDTNRLNGT 480
  481 IPQEILQIPS LAYIDLSNNF LT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.522879
Match: 2omxA
Description: No description for 2omxA was found.

Predicted Domain #2
Region A:
Residues: [503-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHFPEEVGKL ELLVGLGASY NKLSGKMPQA IGGCLSMEFL FMQGNSFDGA IPDISRLVSL  60
   61 KNVDFSNNNL SGRIPRYLAS LPSLRNLNLS MNKFEGRVPT TGVFRNATAV SVFGNTNICG 120
  121 GVREMQLKPC IVQASPRKRK PLSVRKKVVS GICIGIASLL LIIIVASLCW FMKRKKKNNA 180
  181 SDGNPSDSTT LGMFHEKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [701-1031]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYEELHSATS RFSSTNLIGS GNFGNVFKGL LGPENKLVAV KVLNLLKHGA TKSFMAECET  60
   61 FKGIRHRNLV KLITVCSSLD SEGNDFRALV YEFMPKGSLD MWLQLEDLER VNDHSRSLTP 120
  121 AEKLNIAIDV ASALEYLHVH CHDPVAHCDI KPSNILLDDD LTAHVSDFGL AQLLYKYDRE 180
  181 SFLNQFSSAG VRGTIGYAAP EYGMGGQPSI QGDVYSFGIL LLEMFSGKKP TDESFAGDYN 240
  241 LHSYTKSILS GCTSSGGSNA IDEGLRLVLQ VGIKCSEEYP RDRMRTDEAV RELISIRSKF 300
  301 FSSKTTITES PRDAPQSSPQ EWMLNTDMHT M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle