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View Structure Prediction Details

Protein: DTX52_ARATH
Organism: Arabidopsis thaliana
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX52_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
326.0 [0..36] [484..645]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPNIISHT NLLSKIDLEK QNPAPIFPTI TELKSEARSL FSLAFPTILA ALILYARSAI  60
   61 SMLFLGHIGE LELAGGSLAI AFANITGYSV LAGLALGMDP LCSQAFGAGR PKLLSLTLQR 120
  121 TVLFLLTSSV VIVALWLNLG KIMIYLHQDP SISSLAQTYI LCSIPDLLTN SFLHPLRIYL 180
  181 RAQGITSPLT LATLAGTIFH IPMNFFLVSY LGWGFMGVSM AAAASNLLVV IFLVAHVWIA 240
  241 GL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.481486
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [243-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQPTWTRPSS ECFKDWGPVV TLAIPSCIGV CLEWWWYEIM TVLCGLLIDP STPVASMGIL  60
   61 IQTTSLLYIF PSSLGLAVST RVGNELGSNR PNKARLSAIV AVSFAGVMGL TASAFAWGVS 120
  121 DVWGWIFTND VAIIKLTAAA LPILGLCELG NCPQTVGCGV VRGTARPSMA ANINLGAFYL 180
  181 VGTPVAVGLT FWAAYGFCGL WVGLLAAQIC CAAMMLYVVA TTDWEKEAIR ARKLTCTEGV 240
  241 DVVITTTQTN GDLSEPLIYV VTVATD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.823909
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle