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View Structure Prediction Details

Protein: SBT61_ARATH
Organism: Arabidopsis thaliana
Length: 1038 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SBT61_ARATH.

Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLGEASSY PYRSCIIVVF LSVSLFWLRP STYHPQQQNL NPENVTRLES ENETKTNYII  60
   61 RFKQYKPAKD HRIYLESKVR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGWGWIERI NPATKYPTDF GVLWIEESGK EAVVGEIERL EMVKDVNVEF KYQRVLLGGS  60
   61 FPDGKKRPGK IFTSMSFEEG TESSPMADTS NTTLNWSRHL LAQKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1spbP
Description: Subtilisin prosegment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [186-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVTSMFGADH LWKKGYTGAK VKMAIFDTGI RADHPHFRKI KERTNWTNED TLNDNLGHGT  60
   61 FVAGVIAGRN PECLGFASDT EIYAFRVFTD AQVSYTSWFL DAFNYAIATD MDVLNLSIGG 120
  121 PDYLDLPFVE KVWEITASNI IMVSAIGNDG PLYGTLNNPA DQSDVIGVGG IDNDDHIASF 180
  181 SSRGMSTWEL PHGYGRVKPD VVAYGRDIMG SKISTGCKSL SGTSVASPVV AGIVCLLVSV 240
  241 IPEARRKDLL NPASMKQALV EGAAKLSGPN MYEQGAGRVD LLESYEILKS YHP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.30103
Match: 1bh6A
Description: Subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [479-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RASIFPSILD YNDCPYSWPF CRQPLYAGAM PIIFNTTILN GMGVIGYIES PPTWHPANEE  60
   61 GNLLSIHFKY PDVIWPWTGY LALHMQIKEE GAQFTGEIEG NVTVKVYSPP ASGESGPRRS 120
  121 TCSLQLKLKV IPTPPRAKRI LWDQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [624-777]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSIKYPPGYI PRDSLDVRND ILDWHGDHLH TNFHIMYNML RDAGYYIETL GSPLTCFDAQ  60
   61 QYGTLLMVDL EDDYFPEEIE KLRDDVINTG LGLVVFAEWY NVDTMVKMRF FDDNTRSWWT 120
  121 PVTGGANIPA LNNLLASFGI AFGDKILNGD FSID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [778-961]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEQSRYASGT NIVRFPAGGF LHTFPLLDSS ESGATQNLLL TEASKEDPAV LGLLEIGEGR  60
   61 VGVYGDSNCL DSSHMVTNCY WLLKKMLDFS SSNIKDPVLF SKFAKRYSPV IIDEKQLPSR 120
  121 RTDVNFSTYS SVIGKELICE SDSRFEVWGT KGYNLHVRGR NRRLPGYHGI DLGRGLNFTV 180
  181 ESKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [962-1038]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTRWRSAKEG GELSSSRSKS LGGLFNRDEI DMPFLVPTRW IVLAGVVASG VLVLLSIWRI  60
   61 RQKRGRRRRA SGSNRLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle