| Protein: | gi|42567960, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567960, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..45] | [501..17] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MSVSLSYTCL LRLPTFSVPT KPISFNGPLP FYLPRSHISS SCFGFKSNPF IRTQTPRFFK 60
61 CLPQRVSDER RETQVTTEEE EEDEEEKIVV FERLFSNLNQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-505] |
1 11 21 31 41 51
| | | | | |
1 STLKRESGSL SSAIFLVAGT TVGAGILAIP AVTQESGFLA SAVACILCWA FMVVTGLLVA 60
61 EVNVNTMSEL GSGGVSLVSM AKRTLGSVGV QVVSWSYLLI HYTLLVAYIA RSSGILTNFL 120
121 GIPIWESATL FSLIFGGLCF FGSQRFIGAA NGVLVFGVIA SFAALVAVAS GDLHWEALLK 180
181 ANFEAVPMSV PIIALSFVYQ NVVPVLCTDL EGDLPRVRTA IVLGTAIPLG LFLVWDAVIL 240
241 GSFPVDTGVA VEKMVDPLQQ LRSSSVTVGP FVEAFSLFAI ATSYIGFVLG LSDFFSDLLK 300
301 LPSGQNKPLL YLLTLVPPLV LSLLDPEIFF KALDFAGTYG VLVLFGILPA AMSWSDRYIV 360
361 SSSTVTRLPQ LVPGGKLTLS LVMGAAGYVI ISEVIENLSK YLNVS
|
| Detection Method: | |
| Confidence: | 1.31 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
