| Protein: | PUB48_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 456 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB48_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
216.0 | [0..24] | [454..3] |
|
Region A: Residues: [1-456] |
1 11 21 31 41 51
| | | | | |
1 MADSTADATE TNADTLTLRR ELKKVLTENL NDGGVKDRVE TVKSIDEAIR ILNRLKIVES 60
61 KKRKRESDSS SVEVPKEFKC TLSKTIMIDP VIIFSGQTYE KRYITEWLNH DLTCPTAKQV 120
121 LYRVCLTPNH LINELITRWC LANKYDRPAP KPSDIDYVTE LFTDGIESLL QRISSPSSSV 180
181 ADQTEAAKEL ALQTEKFVNV RDFFIKELPD SITRLLTPLS VLGDEVDSNP ELQENIVTAL 240
241 FNMSTFEKNK TVLAENHQVI PLLAKSMKQG SVVTRRNATL TLASLSDIDS NKIIIGNSVA 300
301 LKALIDLIGE LDDLSATHDA LCAVIDLCCD ERENWKKAIS LGLAPAAIKN IKARRNLFES 360
361 LAALALISPH ERVIQEVANL GVIYDLLSIL RKTSCMVTCE NAVVIVGNMY AKSRERSIKK 420
421 ILAEEENQHK TFTKIATQGS VVAVMKAQGI LQCINY
|
| Detection Method: |  |
| Confidence: | 48.154902 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
