| Protein: | PUB47_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB47_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..14] | [439..26] |
|
Region A: Residues: [1-445] |
1 11 21 31 41 51
| | | | | |
1 MADSTADEST NADTLWRELH KVLPEIWYDG GGKDHCEIDE AIRILTCLRK IESKNPESDI 60
61 SPVEVPKEFI CTLSNKIMIE PMLIASGQTF EKSYILEWLK HERTCPRTKQ VLYHRFMIPN 120
121 HLINEVIKEW CLIHNFDRPK TSDEVIDLFT GDLESLLQRI SSPSSVEDQT EAAKELALKA 180
181 KRFSSVCVYF VAKIPDSITR LLTPLSISED SNPEFLENIV TALHIFSTSE KNKTLVAENP 240
241 LVLPLLAKYM KQGTVLTRIH SAATVNSLSY TDSNKIIIGN SEVLKALIHV IEEGDSLATS 300
301 EAFSALSNLC PVKEISEKAV SEGLIRAAIK KIKAGSNVSM LLSLLAFVST QNHQTTEEMD 360
361 NLGLIYDLFS ILRNSNSLVN DENAVVIVYN ICKSYKALQN VVLREEKRDV VLEEENKHGT 420
421 FTRLENQEAG RATSLAKRIL EWILR
|
| Detection Method: |  |
| Confidence: | 55.69897 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
