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View Structure Prediction Details

Protein: PUB46_ARATH
Organism: Arabidopsis thaliana
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB46_ARATH.

Description E-value Query
Range
Subject
Range
PUB13_ARATH - U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1
194.0 [0..1] [458..197]

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Predicted Domain #1
Region A:
Residues: [1-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSTETNAD TLRRELQKVL TEILNDGGGN DRDETEAFSG VVKAIDEAVR ILTCLRKVES  60
   61 KIPESDISPV EVPKEFICTL SNTIMIEPVI IASGQTYEKR YITEWLKHER TCPKTKQVLS 120
  121 HRLWIPNHLI SDLITQWCLV NKYDHQKPSD ELVAELFTSD IEALLQRVSS SSSVADQIEA 180
  181 AKELRHQTKK FPNVRVFFVA GIHDSITRLL SPLSTLDEAV DSSLELQENI VTALFNLSIL 240
  241 ESNKTVIAEN CLVIPLLTKS LKQGTDETRR NAAATLSSLS AIDSNKIIIG NSEAVKALID 300
  301 LIEEGDLLAT KEATSTVFNL CIVLENKGKV VSAGLIHAAT KKIKAGSNVD ELLSLLALIS 360
  361 THNRAVEEMD KLGFIYDLFS ILRKPSSLLT GENAVVIVFN MYDRNRDRSR LKVVGEEENQ 420
  421 HGTFTKLAKQ GSVRAARKAQ GILQWIKRFV TGKEPQRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1qz7A
Description: Beta-catenin binding domain of Axin in complex with beta-catenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.373576425899935 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle