| Protein: | gi|15242771 |
| Organism: | Arabidopsis thaliana |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242771.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..33] | [386..27] |
|
|
230.0 | [0..131] | [439..21] |
|
|
228.0 | [0..131] | [439..21] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MATATYPPPP PYYRLYKDFS ENTDSAPEPP PPIEGTYVCF GGNYTTEDVL PSLEEQGVPQ 60
61
|
| Detection Method: |  |
| Confidence: | 4.055517 |
| Match: | PF05983.2 |
| Description: | No description for PF05983.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.423 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.423 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.418 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.415 | N/A | N/A | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.415 | N/A | N/A | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.376 | N/A | N/A | d.295.1 | Description not found. |
| View | Download | 0.373 | N/A | N/A | d.137.1 | Monooxygenase (hydroxylase) regulatory protein |
| View | Download | 0.373 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.355 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.345 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.251 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
|
Region A: Residues: [61-180] |
1 11 21 31 41 51
| | | | | |
1 LYPKDSNLDY KKELRSLNRE LQLHILELAD VLVDRPSQYA KRIGEISSIF KNLHHLLNSL 60
61 RPHQARATLI HIMELQIQQR KQAVEDIKRR REEAQGLLKD AFVTLDDVCN LMIQQVKPIS 120
121
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 1ykeA |
| Description: | Structure of the mediator MED7/MED21 subcomplex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [181-443] |
1 11 21 31 41 51
| | | | | |
1 SLFNVTREPA FSSAGYEIAA IERDWCKLSK APGYDTRLRE YTVKLVLEKH FASCGKITHI 60
61 YVPRDFERGI LKSVAFMCIK GEGGEEKALL LSGTDAGGWT AIVKPALWQK EIMDPWLPGM 120
121 PKLETHRVRV TGYDTCVPKI DIQMALCEHF SSCGEVTQVV VLPSGSGSIY LQGERCEDKA 180
181 LQLNGCKMGG MNLAYELKKK KMEMEMEMEM GEKKKKKKIE LMKVDKVLKK HMANKKKMDM 240
241 STKKEDGDGE FGHGSLLGED EPL
|
| Detection Method: | |
| Confidence: | 44.522879 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
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