| Protein: | gi|18413894, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 548 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18413894, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
411.0 | [0..1] | [548..1] |
|
|
305.0 | [0..28] | [527..1] |
|
|
296.0 | [0..28] | [521..1] |
|
|
296.0 | [0..70] | [528..30] |
|
Region A: Residues: [1-240] |
1 11 21 31 41 51
| | | | | |
1 MSSSSNPPVC SPEKEERSEM KIEIQCMENK QPLAASCSSA SEGSGCFFLK SPEIATPATV 60
61 SSFPRRTSGP MRRAKGGWTP EEDETLRRAV EKYKGKRWKK IAEFFPERTE VQCLHRWQKV 120
121 LNPELVKGPW TQEEDDKIVE LVKKYGPAKW SVIAKSLPGR IGKQCRERWH NHLNPGIRKD 180
181 AWTVEEESAL MNSHRMYGNK WAEIAKVLPG RTDNAIKNHW NSSLKKKLEF YLATGNLPPP 240
241
|
| Detection Method: |  |
| Confidence: | 52.154902 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-414] |
1 11 21 31 41 51
| | | | | |
1 ASKFIVLKDI ADGDRDSKQS SATKPFKDSD SLTQTSSGNT DSNEVGRDHF DSSSALLEEV 60
61 AASRRIGVNE YACSPVEYKP QLPNLEPISE EVRINSKAYF ERSIQRKVEN GFGTPKHGNL 120
121 YYKSPLDYYF PSEADLQHMY GYECGCSPGA ASPVSLMTTP CNKDSGLTAT RSPE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [415-548] |
1 11 21 31 41 51
| | | | | |
1 SFLREAARTF PNTPSIFRKR RKVVLAAKTD AVVVVNGVVK EVDRKEESKD MRKSLLLETT 60
61 DNCSDDEELG LNGNAFNLSP PYRLRAKRTA VIKSRQLEFT SEKEKQPDNE IEFTSAKEKQ 120
121 PDNEIKTSEE DKPV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
