YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|124301002, gi...
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124301002, gi....

Description E-value Query
Range
Subject
Range
gi|150387963, gi... - gi|77686083|ref|ZP_00801454.1| TatD-related deoxyribonuclease [Alkaliphilus metalliredigenes QYMF], ...
309.0 [0..2] [299..1]

Back

Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFDAHCHL QDPRIITKAP QIISSAVASG VSAFAVNGVS EKDWSLVKEM GAKYPSVVPC  60
   61 FGIHPWYVAE RSPQWFETLK SFFETTPTAA VGEIGLDKGS KGREIDFSEQ VTVFRQQLEL 120
  121 AKELKKPASV HCVRAFGDLL EILKSVGPFP SGVMLHSYLG SAEMVPEFAK LGAYFSFSGF 180
  181 LMSMSEKKAK KMLKAVPSDR ILLETDSPDA LPKAESGCLY FVDGDPSLPE EGNSAQDLDS 240
  241 ASYDKPNVSS DSMKLTKETL NHPANIHIVL GYVAQLLDMK NEELAELSYQ NAVRLFSYEG 300
  301 SKILLDRGTG DVSGHTQNQS TTHVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.221849
Match: 2gzxA
Description: No description for 2gzxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle