| Protein: | gi|22328601 |
| Organism: | Arabidopsis thaliana |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22328601.
| Description | E-value | Query Range |
Subject Range |
|
|
141.0 | [0..126] | [255..285] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MDTTEELKIS HYKLYKCFDF LVVANNKIEV AQAFVKYRRP EYFLPLVGVE FVSLTLVGKH 60
61 FKLGKYSVVV LRGEVHSETL RCLLPKLTDQ PIGSSFLLLR PFRDVGNYCL LLHILPSSKK 120
121 FTLAMQFLCE LIDSTSKEEE DVFR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.588 | N/A | N/A | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.576 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.551 | N/A | N/A | d.224.1 | SufE-like |
| View | Download | 0.531 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
| View | Download | 0.475 | N/A | N/A | c.55.6 | DNA repair protein MutS, domain II |
|
Region A: Residues: [145-263] |
1 11 21 31 41 51
| | | | | |
1 VLVYASDELL DVKTYRALIG CSWELFRCSP GEGCNCPDMC RLQHLIEDST LVKVGIGIDG 60
61 DSVKLFHDYG LLKPNRIRLG NWEVHPLSKQ QLQYAATDAY ASWHLHQVLK DLPDAVSGS
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1yt3A |
| Description: | Crystal Structure of Escherichia coli RNase D, an exoribonuclease involved in structured RNA processing |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.722279828632226 | bayes_pls_golite062009 |
| hydrolase activity | 0.29272620969648 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.24934115119652 | bayes_pls_golite062009 |
| nuclease activity | 0.239989310123501 | bayes_pls_golite062009 |
