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View Structure Prediction Details

Protein: CSLAF_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLAF_ARATH.

Description E-value Query
Range
Subject
Range
CSLA1_ARATH - Probable mannan synthase 1 OS=Arabidopsis thaliana GN=CSLA1 PE=2 SV=1
282.0 [0..1] [537..1]

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Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLLKPLLS LHDLSLNLLS VMFHGETLKA SVDGVGINMS TMWRETRNVF IVPLFKCIVV  60
   61 MCLIISLLVF VESVYMNLVV LYVKLFNRKP EKVYKWEAMQ EDMELGHQNY PMVLVQIPMY 120
  121 NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE 180
  181 NRNGYKAGAL KHGMRHSYVK QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR 240
  241 FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT 300
  301 VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #2
Region A:
Residues: [361-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKRVKIWKKF YVIYSFFFLR KIVVHFFTYF FYCVILPTSV FLPEVNIPNW STIYVPSVIT  60
   61 LLSAIATPRS FYLVIFWVLF ENVMAMHRTK GTLIGLFEGG RVNEWVVTEK LGDTLNTKLL 120
  121 PQNGRLPKRV NLKEMMMGIY ILCCACYDFA FGNAFLYLYL FMQATAFLIS GVGFVGT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle