YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|22329270
Organism: Arabidopsis thaliana
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22329270.

Description E-value Query
Range
Subject
Range
gi|110735897 - gi|110735897|dbj|BAE99924.1| hypothetical protein [Arabidopsis thaliana]
174.0 [0..32] [141..1]

Back

Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRIYMIGR FLSIINVFLK FSNRTVKLSG SVLTEILESS SSSVKKKPEF LQRFENRLHF  60
   61 LDMDWQGQKL AEQLMQILLL IAAVVSFVVG YTTASFRMMM LIYAGGVVLT TLITIPNWPC 120
  121 FNRHHLKWLD PSEAEKHPKP QVVVVSSKKK SSSKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.744727
Match: PF06645.4
Description: No description for PF06645.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle