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View Structure Prediction Details

Protein: gi|18420207
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18420207.

Description E-value Query
Range
Subject
Range
gi|109451848, gi... - gi|109451848|emb|CAK54795.1| C22orf25 [synthetic construct], gi|109451270|emb|CAK54496.1| C22orf25 [...
HGNC:25439|Ensem... - 22 open reading frame 25
C22orf25 - chromosome 22 open reading frame 25
345.0 [0..1] [271..1]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCIAVFLWQS HPLYPFLLFL NRDEDHNRAT EALRWWEDGE TVGGRDLVGG GTWLGCTRHG  60
   61 RLAFLTNFKE ASSFPAAKSR GDLPLRYLQS EKSPAEFAEE IQDEISLYNG FNLVVAHVLS 120
  121 KSMIYITNRP PHGDKLVTQV SPGIHVLSNA NLDSPWPKCL RLREGFQQLL AENGSGEFPV 180
  181 KTMVEEVMTN TVKDEETELP HVFTPETEYH LSSIFVDMQR PTGRYGTRSI SAIIVKSHGD 240
  241 GGGDGEICFY ERHLEEGDSW KEHTQQFVII QNQSI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2bjfA
Description: Crystal Structure of Conjugated Bile Acid Hydrolase from Clostridium perfringens in Complex with Reaction Products Taurine and Deoxycholate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle